Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSGRAN_RS22335Not AvailableNegative3421977 - 342325446517.2
hypothetical proteinSGRAN_RS15660Not AvailablePositive3423467 - 34236556608.17
phoh family proteinSGRAN_RS15665Not AvailableNegative3423971 - 342497836294.1
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabSGRAN_RS15670Not AvailableNegative3425129 - 342649349420.0
1-acyl-sn-glycerol-3-phosphate acyltransferaseSGRAN_RS15675Not AvailableNegative3426501 - 342729529050.5
fur family transcriptional regulatorSGRAN_RS15680Not AvailableNegative3427264 - 342768916170.1
mucr family transcriptional regulatorSGRAN_RS15685Not AvailableNegative3427816 - 342824715558.9
gnat family n-acetyltransferaseSGRAN_RS15690Not AvailableNegative3428358 - 342883417351.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabSGRAN_RS15695Not AvailableNegative3428831 - 342944821116.4
malonic semialdehyde reductaseSGRAN_RS15700Not AvailableNegative3429464 - 343005721511.5

Displaying genes 3231 – 3240 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.