Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit sece | SGRAN_RS15575 | Not Available | Negative | 3404398 - 3404595 | 7396.23 |
| pilz domain-containing protein | SGRAN_RS15580 | Not Available | Positive | 3404967 - 3405587 | 22500.8 |
| multidrug efflux smr transporter | SGRAN_RS15585 | Not Available | Negative | 3405652 - 3405972 | 10965.1 |
| Trna-trp | Not Available | Not Available | Positive | 3406058 - 3406133 | Not Available |
| dmt family transporter | SGRAN_RS15595 | Not Available | Positive | 3406347 - 3407279 | 33321.0 |
| glutathione s-transferase family protein | SGRAN_RS15600 | Not Available | Positive | 3407276 - 3407893 | 23107.6 |
| sigma-70 family rna polymerase sigma factor | SGRAN_RS15605 | Not Available | Negative | 3408058 - 3408930 | 31506.1 |
| carboxymuconolactone decarboxylase family protein | SGRAN_RS15610 | Not Available | Negative | 3408930 - 3409388 | 16838.2 |
| doxx family protein | SGRAN_RS15615 | Not Available | Positive | 3409656 - 3410033 | 13327.6 |
| duf6607 family protein | SGRAN_RS15620 | Not Available | Negative | 3410109 - 3411083 | 37593.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.