Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02281 family clan aa aspartic protease | SGRAN_RS15330 | Not Available | Negative | 3356618 - 3357181 | 18952.6 |
| hypothetical protein | SGRAN_RS15335 | Not Available | Negative | 3357228 - 3357851 | 21580.7 |
| folate-binding protein ygfz | SGRAN_RS15340 | Not Available | Negative | 3357883 - 3358620 | 26899.8 |
| dihydroorotase | SGRAN_RS15345 | Not Available | Positive | 3358689 - 3359711 | 36698.0 |
| eama family transporter rard | SGRAN_RS15350 | Not Available | Negative | 3359728 - 3360645 | 33147.8 |
| hypothetical protein | SGRAN_RS15355 | Not Available | Negative | 3360671 - 3360892 | 7531.95 |
| glycine zipper 2tm domain-containing protein | SGRAN_RS15360 | Not Available | Positive | 3361109 - 3361513 | 14189.9 |
| gnat family n-acetyltransferase | SGRAN_RS15365 | Not Available | Positive | 3361938 - 3362489 | 20344.2 |
| duf1330 domain-containing protein | SGRAN_RS15370 | Not Available | Positive | 3362486 - 3362923 | 16061.1 |
| hypothetical protein | SGRAN_RS15375 | Not Available | Positive | 3363068 - 3363814 | 25524.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.