Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase n-terminal domain-containing protein | SGRAN_RS15085 | Not Available | Positive | 3303680 - 3304531 | 30944.6 |
| acyl-coa dehydrogenase family protein | SGRAN_RS15090 | Not Available | Positive | 3304551 - 3305744 | 43513.9 |
| helix-turn-helix domain-containing protein | SGRAN_RS15095 | Not Available | Negative | 3305738 - 3306475 | 25986.2 |
| acyl-coa dehydrogenase family protein | SGRAN_RS15100 | Not Available | Positive | 3306686 - 3307855 | 42472.9 |
| coa transferase | SGRAN_RS15105 | Not Available | Positive | 3307891 - 3309087 | 42361.2 |
| acetyl-coa c-acetyltransferase | SGRAN_RS15110 | Not Available | Positive | 3309220 - 3310434 | 42975.3 |
| acyl-coa dehydrogenase family protein | SGRAN_RS15115 | Not Available | Positive | 3310615 - 3312210 | 55994.0 |
| multidrug efflux smr transporter | SGRAN_RS15120 | Not Available | Positive | 3312748 - 3313131 | 13225.8 |
| hypothetical protein | SGRAN_RS15125 | Not Available | Positive | 3313128 - 3314378 | 43512.5 |
| ubia family prenyltransferase | SGRAN_RS15130 | Not Available | Positive | 3314365 - 3315798 | 51879.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.