Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ei24 domain-containing proteinSGRAN_RS01245Not AvailablePositive268911 - 26960624355.8
hypothetical proteinSGRAN_RS01250Not AvailablePositive269603 - 26998013141.7
trna epoxyqueuosine(34) reductase quegSGRAN_RS01255Not AvailableNegative270099 - 27116337678.2
abc transporter atp-binding proteinSGRAN_RS01260Not AvailablePositive271231 - 27218734194.3
abc transporter permeaseSGRAN_RS01265Not AvailablePositive272184 - 27342242606.8
cytochrome p450SGRAN_RS01270Not AvailablePositive274051 - 27530748154.2
hypothetical proteinSGRAN_RS01275Not AvailableNegative275344 - 27713765652.9
gtra family proteinSGRAN_RS01280Not AvailableNegative277142 - 27756414767.8
nad(p)/fad-dependent oxidoreductaseSGRAN_RS01285Not AvailableNegative277569 - 27909556309.4
glycine zipper 2tm domain-containing proteinSGRAN_RS01290Not AvailablePositive279567 - 27993513844.2

Displaying genes 301 – 310 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.