Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | SGRAN_RS14690 | Not Available | Positive | 3218175 - 3218519 | 12003.3 |
| nad(p)-dependent oxidoreductase | SGRAN_RS14695 | Not Available | Positive | 3218920 - 3220050 | 41349.5 |
| flavin reductase family protein | SGRAN_RS14700 | Not Available | Negative | 3220060 - 3220542 | 17047.5 |
| caib/baif coa-transferase family protein | SGRAN_RS14705 | Not Available | Negative | 3220532 - 3221701 | 40417.7 |
| voc family protein | SGRAN_RS14710 | Not Available | Negative | 3221698 - 3222390 | 24894.5 |
| enoyl-coa hydratase-related protein | SGRAN_RS14715 | Not Available | Negative | 3222423 - 3223250 | 29467.7 |
| acyl-coa dehydrogenase | SGRAN_RS14720 | Not Available | Negative | 3223294 - 3224493 | 43995.9 |
| tonb-dependent receptor | SGRAN_RS14725 | Not Available | Negative | 3224549 - 3226816 | 81973.1 |
| caib/baif coa-transferase family protein | SGRAN_RS14730 | Not Available | Negative | 3226914 - 3228083 | 41998.1 |
| sdr family nad(p)-dependent oxidoreductase | SGRAN_RS14735 | Not Available | Negative | 3228123 - 3228914 | 27573.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.