Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1837 domain-containing proteinSGRAN_RS14545Not AvailableNegative3144397 - 314535935216.4
duf6933 domain-containing proteinSGRAN_RS14550Not AvailablePositive3145622 - 314613419048.2
res family nad+ phosphorylaseSGRAN_RS14555Not AvailableNegative3146200 - 314693426701.5
mbca/pars/xre antitoxin family proteinSGRAN_RS14560Not AvailableNegative3146931 - 314734415272.4
strawberry notch c-terminal domain-containing proteinSGRAN_RS14565Not AvailableNegative3147398 - 314909262457.1
tyrosine-type recombinase/integraseSGRAN_RS14570Not AvailableNegative3149295 - 315029937574.8
tyrosine-type recombinase/integraseSGRAN_RS14575Not AvailableNegative3150296 - 315121034061.8
tyrosine-type recombinase/integraseSGRAN_RS14580Not AvailableNegative3151204 - 315275158507.9
copper resistance protein copcSGRAN_RS23275Not AvailableNegative3152897 - 315322311622.9
site-specific integraseSGRAN_RS14585Not AvailableNegative3153308 - 315431237611.2

Displaying genes 3001 – 3010 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.