Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorSGRAN_RS01195Not AvailableNegative256622 - 25728724449.6
tonb-dependent receptorSGRAN_RS01200Not AvailablePositive257487 - 25981483342.0
caib/baif coa-transferase family proteinSGRAN_RS01205Not AvailableNegative259869 - 26100839596.5
mitofilin family membrane proteinSGRAN_RS01210Not AvailableNegative261091 - 26200531959.3
uroporphyrinogen-iii synthaseSGRAN_RS01215Not AvailableNegative262015 - 26271323701.7
hydroxymethylbilane synthaseSGRAN_RS01220Not AvailableNegative262710 - 26366333015.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadSGRAN_RS01225Not AvailablePositive264131 - 26516535268.5
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseSGRAN_RS01230Not AvailablePositive265162 - 26615433475.6
lipopolysaccharide biosynthesis proteinSGRAN_RS01235Not AvailablePositive266245 - 26778654221.6
adenosine kinaseSGRAN_RS01240Not AvailableNegative267805 - 26880334405.5

Displaying genes 291 – 300 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.