Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenase family proteinSGRAN_RS14030Not AvailableNegative3033271 - 303446443920.2
3-oxoadipyl-coa thiolaseSGRAN_RS14035Not AvailableNegative3034480 - 303568841715.9
caib/baif coa-transferase family proteinSGRAN_RS14040Not AvailableNegative3035693 - 303691043354.5
aldehyde dehydrogenase family proteinSGRAN_RS14045Not AvailableNegative3037100 - 303852751126.2
3-phenylpropionate/cinnamic acid dioxygenase subunit betaSGRAN_RS14050Not AvailableNegative3038562 - 303910721325.4
aromatic ring-hydroxylating dioxygenase subunit alphaSGRAN_RS14055Not AvailableNegative3039132 - 304051451769.0
hpch/hpai aldolase/citrate lyase family proteinSGRAN_RS14060Not AvailableNegative3040548 - 304131526897.3
2-oxo-hept-4-ene-1,7-dioate hydrataseSGRAN_RS14065Not AvailableNegative3041321 - 304212429110.8
alpha/beta fold hydrolaseSGRAN_RS14070Not AvailableNegative3042129 - 304298331966.9
3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenaseSGRAN_RS14075Not AvailableNegative3043041 - 304385327490.0

Displaying genes 2891 – 2900 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.