Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | SGRAN_RS13785 | Not Available | Negative | 2967855 - 2968475 | 21680.2 |
| malate synthase g | SGRAN_RS13790 | Not Available | Negative | 2968564 - 2970657 | 75058.5 |
| diguanylate cyclase | SGRAN_RS13795 | Not Available | Negative | 2970792 - 2971964 | 41547.1 |
| hydrolase | SGRAN_RS13800 | Not Available | Positive | 2972158 - 2973366 | 41541.9 |
| arginine n-succinyltransferase | SGRAN_RS13805 | Not Available | Positive | 2973363 - 2974364 | 36240.2 |
| n-succinylarginine dihydrolase | SGRAN_RS13810 | Not Available | Positive | 2974415 - 2975665 | 44450.9 |
| hypothetical protein | SGRAN_RS13815 | Not Available | Positive | 2975793 - 2976029 | 8332.57 |
| alpha/beta fold hydrolase | SGRAN_RS13820 | Not Available | Positive | 2976108 - 2976866 | 26471.3 |
| alpha/beta fold hydrolase | SGRAN_RS13825 | Not Available | Negative | 2976814 - 2977854 | 38036.1 |
| dead/deah box helicase | SGRAN_RS13830 | Not Available | Negative | 2977952 - 2979319 | 50368.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.