Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SGRAN_RS13685 | Not Available | Negative | 2945070 - 2946269 | 44935.8 |
| xrta/pep-cterm system amidotransferase | SGRAN_RS13690 | Not Available | Negative | 2946350 - 2948245 | 69467.5 |
| epsi domain-containing exosortase | SGRAN_RS13695 | Not Available | Negative | 2948257 - 2949738 | 52403.3 |
| tigr03087 family pep-cterm/xrta system glycosyltransferase | SGRAN_RS13700 | Not Available | Negative | 2949735 - 2950943 | 43124.9 |
| femab family xrta/pep-cterm system-associated protein | SGRAN_RS13705 | Not Available | Negative | 2950972 - 2952042 | 38154.6 |
| xrta system polysaccharide deacetylase | SGRAN_RS13710 | Not Available | Negative | 2952039 - 2952899 | 31993.9 |
| xrta/pep-cterm system-associated atpase | SGRAN_RS13715 | Not Available | Negative | 2952944 - 2954089 | 42072.1 |
| hypothetical protein | SGRAN_RS13720 | Not Available | Negative | 2954113 - 2955825 | 60316.5 |
| aaa family atpase | SGRAN_RS13725 | Not Available | Negative | 2955822 - 2956850 | 35632.1 |
| xrta system polysaccharide chain length determinant | SGRAN_RS13730 | Not Available | Negative | 2956865 - 2958406 | 54162.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.