Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | SGRAN_RS13635 | Not Available | Negative | 2937205 - 2937642 | 15206.1 |
| peroxiredoxin | SGRAN_RS13640 | Not Available | Positive | 2937743 - 2938303 | 19795.9 |
| acetolactate synthase large subunit | SGRAN_RS13645 | Not Available | Positive | 2938525 - 2940072 | 53531.2 |
| fad-binding oxidoreductase | SGRAN_RS13650 | Not Available | Positive | 2940106 - 2941515 | 49491.7 |
| Trna-phe | Not Available | Not Available | Positive | 2941598 - 2941673 | Not Available |
| dna gyrase inhibitor yacg | SGRAN_RS13660 | Not Available | Negative | 2941768 - 2941962 | 7145.22 |
| ribonuclease | SGRAN_RS13665 | Not Available | Negative | 2941952 - 2942920 | 33887.7 |
| nucleoside triphosphate pyrophosphatase | SGRAN_RS13670 | Not Available | Negative | 2942913 - 2943485 | 20382.7 |
| translation initiation factor if-1 | SGRAN_RS13675 | Not Available | Negative | 2943512 - 2943730 | 8411.46 |
| cupin-like domain-containing protein | SGRAN_RS13680 | Not Available | Negative | 2944207 - 2945073 | 32068.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.