Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorSGRAN_RS13200Not AvailablePositive2834768 - 283699079771.6
marr family winged helix-turn-helix transcriptional regulatorSGRAN_RS13205Not AvailablePositive2837015 - 283748817715.2
fmn-dependent nadh-azoreductaseSGRAN_RS13210Not AvailablePositive2837502 - 283812523474.1
duf1294 domain-containing proteinSGRAN_RS13215Not AvailablePositive2838180 - 283853012879.2
aspartate carbamoyltransferase catalytic subunitSGRAN_RS13220Not AvailablePositive2838544 - 283953935976.5
dihydroorotase family proteinSGRAN_RS13225Not AvailablePositive2839530 - 284074441758.9
septal ring lytic transglycosylase rlpa family proteinSGRAN_RS13230Not AvailableNegative2841208 - 284178620439.7
phosphoserine phosphatase serbSGRAN_RS13235Not AvailableNegative2841789 - 284267330862.3
trna (adenosine(37)-n6)-dimethylallyltransferase miaaSGRAN_RS13240Not AvailablePositive2842672 - 284363433895.8
biosynthetic-type acetolactate synthase large subunitSGRAN_RS13245Not AvailablePositive2843721 - 284547563048.8

Displaying genes 2721 – 2730 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.