Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2810325 - 2810409 | Not Available |
| hypothetical protein | SGRAN_RS13105 | Not Available | Positive | 2810585 - 2810779 | 6672.71 |
| amidohydrolase | SGRAN_RS13110 | Not Available | Positive | 2810845 - 2812539 | 61448.4 |
| duf885 family protein | SGRAN_RS13115 | Not Available | Negative | 2812590 - 2814374 | 64414.4 |
| duf885 family protein | SGRAN_RS13120 | Not Available | Negative | 2814498 - 2816123 | 58338.9 |
| duf885 family protein | SGRAN_RS13125 | Not Available | Negative | 2816149 - 2817945 | 67156.8 |
| tonb-dependent receptor domain-containing protein | SGRAN_RS13130 | Not Available | Negative | 2818101 - 2819168 | 38334.2 |
| duf3311 domain-containing protein | SGRAN_RS13135 | Not Available | Negative | 2819165 - 2819440 | 10230.4 |
| amidohydrolase family protein | SGRAN_RS13140 | Not Available | Negative | 2819459 - 2820772 | 46826.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | SGRAN_RS13145 | Not Available | Negative | 2820998 - 2822464 | 53468.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.