Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
parb/repb/spo0j family partition proteinSGRAN_RS01050Not AvailableNegative217105 - 21924078372.7
duf2958 domain-containing proteinSGRAN_RS01055Not AvailableNegative219418 - 21978913684.3
copper resistance protein copcSGRAN_RS01060Not AvailableNegative219786 - 2200228406.9
ardc family proteinSGRAN_RS01065Not AvailableNegative220079 - 22098133127.7
hypothetical proteinSGRAN_RS01070Not AvailableNegative221039 - 22324680761.9
hypothetical proteinSGRAN_RS01075Not AvailableNegative223243 - 22503065525.4
site-specific integraseSGRAN_RS01080Not AvailableNegative225027 - 22641851577.8
copper resistance protein copcSGRAN_RS01085Not AvailableNegative226588 - 22734927988.2
abiei antitoxin n-terminal domain-containing proteinSGRAN_RS01090Not AvailablePositive227625 - 22821820936.6
nucleotidyl transferase abieii/abigii toxin family proteinSGRAN_RS01095Not AvailablePositive228211 - 22922736642.3

Displaying genes 261 – 270 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.