Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSGRAN_RS01005Not AvailableNegative206710 - 20715015180.2
hypothetical proteinSGRAN_RS22480Not AvailableNegative207287 - 2074545853.81
hypothetical proteinSGRAN_RS01010Not AvailablePositive207680 - 20797910728.0
duf2493 domain-containing proteinSGRAN_RS01015Not AvailableNegative208243 - 20916934482.6
toprim domain-containing proteinSGRAN_RS01020Not AvailableNegative209515 - 21055537336.8
bifunctional class i sam-dependent methyltransferase/dead/deah box helicaseSGRAN_RS01025Not AvailableNegative210555 - 214886156126.0
hypothetical proteinSGRAN_RS01030Not AvailableNegative215044 - 21568825022.9
hypothetical proteinSGRAN_RS01035Not AvailableNegative215681 - 21609714978.3
hypothetical proteinSGRAN_RS01040Not AvailableNegative216161 - 21671820005.2
hypothetical proteinSGRAN_RS01045Not AvailableNegative216827 - 2170487975.43

Displaying genes 251 – 260 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.