Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts sugar transporter subunit iiaSGRAN_RS00860Not AvailablePositive183045 - 18349716045.8
hsp20 family proteinSGRAN_RS00865Not AvailablePositive183494 - 18388314398.1
lysr family transcriptional regulatorSGRAN_RS00870Not AvailablePositive184125 - 18510836407.6
duf2274 domain-containing proteinSGRAN_RS00875Not AvailableNegative185041 - 1852808681.56
trbi/virb10 family proteinSGRAN_RS00880Not AvailableNegative185282 - 18639439382.1
p-type conjugative transfer protein trbgSGRAN_RS00885Not AvailableNegative186463 - 18744635427.1
conjugal transfer protein trbfSGRAN_RS00890Not AvailableNegative187443 - 18813225751.6
p-type conjugative transfer protein trblSGRAN_RS00895Not AvailableNegative188129 - 18949344901.4
putative entry exclusion protein trbk-altSGRAN_RS00900Not AvailableNegative189497 - 18978110370.5
p-type conjugative transfer protein trbjSGRAN_RS00905Not AvailableNegative189791 - 19055827585.6

Displaying genes 221 – 230 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.