Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SGRAN_RS00625 | Not Available | Negative | 129949 - 130308 | 12484.6 |
| tonb-dependent receptor | SGRAN_RS00630 | Not Available | Positive | 130622 - 132697 | 76229.9 |
| cytochrome c | SGRAN_RS00635 | Not Available | Negative | 132886 - 133515 | 22735.4 |
| duf4440 domain-containing protein | SGRAN_RS00640 | Not Available | Negative | 133773 - 134249 | 17229.4 |
| heavy metal translocating p-type atpase | SGRAN_RS00645 | Not Available | Negative | 134293 - 136614 | 81029.6 |
| class i sam-dependent methyltransferase | SGRAN_RS00650 | Not Available | Negative | 136781 - 137458 | 24942.1 |
| arac family transcriptional regulator | SGRAN_RS00655 | Not Available | Negative | 137596 - 138321 | 25235.2 |
| copper homeostasis membrane protein copd | SGRAN_RS00660 | Not Available | Negative | 138318 - 139286 | 33897.1 |
| copper homeostasis periplasmic binding protein copc | SGRAN_RS00665 | Not Available | Negative | 139293 - 139682 | 13648.9 |
| hypothetical protein | SGRAN_RS00670 | Not Available | Positive | 139820 - 140086 | 9096.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.