Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dicarboxylate/amino acid:cation symporterSGRAN_RS00575Not AvailableNegative116746 - 11803245070.1
amidohydrolase family proteinSGRAN_RS00580Not AvailablePositive118236 - 12003563169.2
mbl fold metallo-hydrolaseSGRAN_RS00585Not AvailablePositive120222 - 12116934821.2
bifunctional protein tyrosine phosphatase family protein/nad(p)/fad-dependent oxidoreductaseSGRAN_RS00590Not AvailablePositive121201 - 12278155131.3
sulfite exporter taue/safe family proteinSGRAN_RS00595Not AvailablePositive122778 - 12357526086.4
copper-binding proteinSGRAN_RS00600Not AvailableNegative123601 - 12397212588.2
efflux rnd transporter permease subunitSGRAN_RS00605Not AvailableNegative123969 - 127103112717.0
efflux rnd transporter periplasmic adaptor subunitSGRAN_RS00610Not AvailableNegative127100 - 12833242624.2
tolc family proteinSGRAN_RS00615Not AvailableNegative128329 - 12955543890.1
hypothetical proteinSGRAN_RS00620Not AvailableNegative129619 - 1298859430.42

Displaying genes 161 – 170 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.