Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vcbs repeat-containing proteinSGRAN_RS00525Not AvailableNegative102077 - 10356753687.2
tonb-dependent siderophore receptorSGRAN_RS00530Not AvailableNegative103595 - 10606987739.6
cystathionine beta-lyaseSGRAN_RS00535Not AvailableNegative106145 - 10735042999.8
rna polymerase sigma factorSGRAN_RS00540Not AvailableNegative107365 - 10805425512.5
dicarboxylate/amino acid:cation symporterSGRAN_RS00545Not AvailablePositive108369 - 10969444502.2
lrp/asnc family transcriptional regulatorSGRAN_RS00550Not AvailablePositive109707 - 11018617860.6
amidohydrolase family proteinSGRAN_RS00555Not AvailableNegative110209 - 11145643125.2
amidohydrolaseSGRAN_RS00560Not AvailableNegative111458 - 11292151635.6
tonb-dependent siderophore receptorSGRAN_RS00565Not AvailableNegative113005 - 116103111294.0
rida family proteinSGRAN_RS00570Not AvailableNegative116282 - 11674316014.4

Displaying genes 151 – 160 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.