Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein trbfSGRAN_RS00375Not AvailablePositive69574 - 7025725407.2
p-type conjugative transfer protein trbgSGRAN_RS00380Not AvailablePositive70275 - 7109029778.7
trbi/virb10 family proteinSGRAN_RS00385Not AvailablePositive71087 - 7231643088.4
duf2274 domain-containing proteinSGRAN_RS00390Not AvailablePositive72313 - 725348230.17
arsenical resistance protein arshSGRAN_RS00395Not AvailableNegative72562 - 7331728201.7
acr3 family arsenite efflux transporterSGRAN_RS00400Not AvailableNegative73323 - 7438739064.2
arsenate reductase (glutaredoxin)SGRAN_RS00405Not AvailableNegative74398 - 7482915450.8
arsenate reductase arscSGRAN_RS00410Not AvailableNegative74826 - 7534718920.4
helix-turn-helix transcriptional regulatorSGRAN_RS00415Not AvailableNegative75379 - 7570811670.3
cytochrome c/ftr1 family iron permeaseSGRAN_RS00420Not AvailableNegative75842 - 7779468759.3

Displaying genes 121 – 130 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.