Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSGRAN_RS22870Not AvailableNegative61658 - 6213117468.6
hypothetical proteinSGRAN_RS00330Not AvailableNegative62173 - 6250511414.7
luxr c-terminal-related transcriptional regulatorSGRAN_RS00335Not AvailableNegative62567 - 6308518967.9
p-type conjugative transfer atpase trbbSGRAN_RS00340Not AvailablePositive63306 - 6428634398.7
trbc/virb2 family proteinSGRAN_RS00345Not AvailablePositive64283 - 6461511322.1
virb3 family type iv secretion system proteinSGRAN_RS00350Not AvailablePositive64615 - 648849595.9
conjugal transfer protein trbeSGRAN_RS00355Not AvailablePositive64881 - 6731688627.7
p-type conjugative transfer protein trbjSGRAN_RS00360Not AvailablePositive67323 - 6803924932.6
putative entry exclusion protein trbk-altSGRAN_RS00365Not AvailablePositive68041 - 682928809.58
p-type conjugative transfer protein trblSGRAN_RS00370Not AvailablePositive68289 - 6956942477.8

Displaying genes 111 – 120 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.