Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter-associated beta strand repeat-containing protein | SGRAN_RS04935 | Not Available | Positive | 1048212 - 1055933 | 251306.0 |
| rida family protein | SGRAN_RS04940 | Not Available | Positive | 1056021 - 1056365 | 11862.1 |
| lysr family transcriptional regulator | SGRAN_RS04945 | Not Available | Positive | 1056413 - 1057312 | 33082.4 |
| fad-dependent oxidoreductase | SGRAN_RS04950 | Not Available | Positive | 1057435 - 1058682 | 43842.7 |
| dicarboxylate/amino acid:cation symporter | SGRAN_RS04955 | Not Available | Positive | 1058844 - 1060154 | 45143.3 |
| gamma-glutamyltransferase | SGRAN_RS04960 | Not Available | Positive | 1060163 - 1061881 | 60487.0 |
| gamma-glutamyltransferase family protein | SGRAN_RS04965 | Not Available | Positive | 1061878 - 1063581 | 59056.7 |
| capa family protein | SGRAN_RS04970 | Not Available | Positive | 1063603 - 1065606 | 69918.1 |
| d-alanyl-d-alanine carboxypeptidase family protein | SGRAN_RS04975 | Not Available | Positive | 1065629 - 1066555 | 32266.8 |
| nepr family anti-sigma factor | SGRAN_RS22535 | Not Available | Negative | 1066706 - 1066876 | 6082.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.