Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | TFA |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediment of the river Elbe |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | SGRAN_RS04785 | Not Available | Positive | 1009767 - 1010441 | 23816.1 |
| arsenate reductase | SGRAN_RS04790 | Not Available | Positive | 1010518 - 1010862 | 12644.1 |
| rna polymerase sigma factor | SGRAN_RS04795 | Not Available | Positive | 1010938 - 1011480 | 21303.5 |
| fecr family protein | SGRAN_RS04800 | Not Available | Positive | 1011480 - 1012559 | 37816.0 |
| tonb-dependent receptor | SGRAN_RS04805 | Not Available | Positive | 1013034 - 1016486 | 127355.0 |
| glycerophosphodiester phosphodiesterase | SGRAN_RS04810 | Not Available | Positive | 1016826 - 1017899 | 38595.1 |
| aldo/keto reductase | SGRAN_RS04815 | Not Available | Positive | 1017896 - 1018831 | 32621.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SGRAN_RS04820 | Not Available | Positive | 1018990 - 1019853 | 30575.2 |
| tetratricopeptide repeat protein | SGRAN_RS04825 | Not Available | Positive | 1020000 - 1020770 | 27422.6 |
| pqq-binding-like beta-propeller repeat protein | SGRAN_RS04830 | Not Available | Positive | 1020772 - 1022109 | 46451.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.