Sphingopyxis granuli str. TFA

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis granuli
StrainTFA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of the river Elbe
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis granuli strain TFA chromosome, complete genome.

Gene Summary

Adenine Count

790410 bp

Thymine Count

792050 bp

Guanine Count

1549001 bp

Cytosine Count

1548392 bp

Genome Length

4679853 bp

Protein-coding Genes

4326 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cdf family co(ii)/ni(ii) efflux transporter dmefSGRAN_RS00230Not AvailableNegative47123 - 4809434864.9
metal/formaldehyde-sensitive transcriptional repressorSGRAN_RS21390Not AvailableNegative48105 - 483779560.51
hypothetical proteinSGRAN_RS00240Not AvailableNegative48497 - 487489606.46
duf736 family proteinSGRAN_RS00245Not AvailablePositive49096 - 4941611271.3
type ii toxin-antitoxin system hipa family toxinSGRAN_RS00250Not AvailableNegative49492 - 5076646208.8
helix-turn-helix domain-containing proteinSGRAN_RS00255Not AvailableNegative50756 - 5110613178.0
hypothetical proteinSGRAN_RS22455Not AvailablePositive51446 - 516106069.42
hypothetical proteinSGRAN_RS00260Not AvailablePositive51734 - 5217415021.0
duf736 domain-containing proteinSGRAN_RS00265Not AvailablePositive52496 - 5281011552.7
transcriptional regulator domain-containing proteinSGRAN_RS22755Not AvailablePositive52924 - 5322910888.3

Displaying genes 91 – 100 of 4401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.