Cupriavidus metallidurans CH34

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus metallidurans CH34. This strain was first identified in the heavy metal-contaminated sludge of a settling tank in Belgium in the late 1970s. Metal resistance functions are predominantly encoded on two plasmids, pMOL28 and pMOL30, which produce metal exporters that pump metal ions out of the cell, thus protecting intracellular macromolecules from the toxic effects of high concentrations of metal. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Burkholderiaceae
Genus	Cupriavidus
Species	Cupriavidus metallidurans
Strain	CH34

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	Not Available

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	30
Temperature range	Mesophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Singles
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Cupriavidus metallidurans CH34 plasmid pMOL28, complete sequence.

NC_007972.2 NC_007974.2 NC_007971.2 NC_007973.1

Gene Summary

Adenine Count

34395 bp

Thymine Count

33323 bp

Guanine Count

51333 bp

Cytosine Count

52408 bp

Genome Length

171459 bp

Protein-coding Genes

168 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
dmt family transporter	RMET_RS07355	Not Available	Negative	1580421 - 1581380	34111.4
imp dehydrogenase	RMET_RS07360	Not Available	Positive	1581506 - 1582969	52023.8
hypothetical protein	RMET_RS07365	Not Available	Positive	1583057 - 1583698	22783.8
glutamine-hydrolyzing gmp synthase	RMET_RS07370	Not Available	Positive	1583673 - 1585292	59576.7
tyrosine-type recombinase/integrase	RMET_RS07375	Not Available	Positive	1585594 - 1586850	47275.5
hypothetical protein	RMET_RS07380	Not Available	Positive	1587051 - 1587326	10358.0
helix-turn-helix transcriptional regulator	RMET_RS07385	Not Available	Positive	1587331 - 1587855	18644.3
helix-turn-helix transcriptional regulator	RMET_RS07390	Not Available	Negative	1587871 - 1588260	14810.6
qat anti-phage system tatd family nuclease qatd	RMET_RS07395	Not Available	Negative	1588375 - 1589124	27581.1
qat anti-phage system quec-like protein qatc	RMET_RS07400	Not Available	Negative	1589138 - 1590505	49549.3

Displaying genes 4221 – 4230 of 6407 in total

Pathways

1335 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Taurine Metabolism

TCA Cycle

Glycolysis and Pyruvate Dehydrogenase

Arginine Metabolism

Ornithine Metabolism

Show All 1335 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000250	2,5-didehydro-D-gluconateC6H7O7	`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000428	3-oxoadipateC6H6O5	Not available	Average158.11Da Monoisotopic158.022620453Da
BASm0000516	6-deoxyerythronolide BC21H38O6	Not available	Average386.5228Da Monoisotopic386.2668389Da
BASm0000553	biphenyl-2,3-diolC12H10O2	Not available	Average186.2066Da Monoisotopic186.0680796Da
BASm0000592	(S)-1-phenylethanolC8H10O	Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000599	2,5-dihydroxypyridineC5H5NO2	Not available	Average111.1Da Monoisotopic111.0320284Da
BASm0000893	crotonobetaineC7H13NO2	`927-89-9`	Average143.1836Da Monoisotopic143.0946287Da
BASm0000989	GlycerolC3H8O3	`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da

Displaying 1–10 of 1772 metabolites

Health Effects

No health effects information available for this bacterium.