Cupriavidus metallidurans CH34

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus metallidurans CH34. This strain was first identified in the heavy metal-contaminated sludge of a settling tank in Belgium in the late 1970s. Metal resistance functions are predominantly encoded on two plasmids, pMOL28 and pMOL30, which produce metal exporters that pump metal ions out of the cell, thus protecting intracellular macromolecules from the toxic effects of high concentrations of metal. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Burkholderiaceae
Genus	Cupriavidus
Species	Cupriavidus metallidurans
Strain	CH34

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	Not Available

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Facultative
Optimal temperature	30
Temperature range	Mesophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Singles
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Cupriavidus metallidurans CH34

NC_007972.2 NC_007974.2 NC_007971.2 NC_007973.1

Gene Summary

Adenine Count

46254 bp

Thymine Count

46922 bp

Guanine Count

71306 bp

Cytosine Count

69238 bp

Genome Length

233720 bp

Protein-coding Genes

249 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
para family protein	RMET_RS30870	Not Available	Positive	1 - 1191	44398.3
parb/repb/spo0j family partition protein	RMET_RS30875	Not Available	Positive	1188 - 2186	36525.7
helix-turn-helix domain-containing protein	RMET_RS30880	Not Available	Positive	2425 - 3603	43213.7
hypothetical protein	RMET_RS33345	Not Available	Positive	3718 - 3909	6905.81
hypothetical protein	RMET_RS31950	Not Available	Positive	4777 - 5484	25891.1
res family nad+ phosphorylase	RMET_RS30890	Not Available	Positive	5484 - 6140	24031.7
tyrosine-type recombinase/integrase	RMET_RS30895	Not Available	Negative	6171 - 6980	29921.0
hypothetical protein	RMET_RS31955	Not Available	Positive	7593 - 8423	29090.3
hypothetical protein	RMET_RS33890	Not Available	Negative	8962 - 9165	7497.9
hypothetical protein	RMET_RS30910	Not Available	Positive	9309 - 9872	21230.2

Displaying genes 1 – 10 of 6407 in total

Pathways

1469 pathways

2,3-Dihydroxybenzoate Biosynthesis pathway thumbnail

2,3-Dihydroxybenzoate Biosynthesis

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides pathway thumbnail

Biosynthesis of Siderophore Group Nonribosomal Peptides

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis pathway thumbnail

Lysine Biosynthesis

Lysine Biosynthesis

Taurine Metabolism pathway thumbnail

Taurine Metabolism

Taurine Metabolism

TCA Cycle pathway thumbnail

Glycolysis and Pyruvate Dehydrogenase pathway thumbnail

Glycolysis and Pyruvate Dehydrogenase

Glycolysis and Pyruvate Dehydrogenase

Arginine Metabolism pathway thumbnail

Arginine Metabolism

Arginine Metabolism

Ornithine Metabolism pathway thumbnail

Ornithine Metabolism

Ornithine Metabolism

Show All 1469 Pathways

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000173	(R)-3-Hydroxybutyric acidC4H8O3		`625-72-3`	Average104.0473Da Monoisotopic104.047344122Da
BASm0000234	(3R)-hydroxybutanoate dimerC8H13O5		Not available	Average189.188Da Monoisotopic189.0768471Da
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P		Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000250	2,5-didehydro-D-gluconateC6H7O7		`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000251	2-dehydropantoateC6H9O4		Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000253	2-oxopent-4-enoateC5H5O3		Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5		Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000272	(E)-4-coumarateC9H7O3		Not available	Average163.1501Da Monoisotopic163.0395191Da
BASm0000377	(S)-malateC4H4O5		Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6		Not available	Average455.432Da Monoisotopic455.1564286Da

Displaying 1–10 of 1888 metabolites

Health Effects

No health effects information available for this bacterium.