Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane protein ykgbSAMN05444481_102369Not AvailableNegative978979 - 97939815366.4
3-isopropylmalate/(r)-2-methylmalate dehydratase large subunitSAMN05444481_102370Not AvailablePositive979985 - 98137950184.0
3-isopropylmalate/(r)-2-methylmalate dehydratase small subunitSAMN05444481_102371Not AvailablePositive981549 - 98214521975.7
d-citramalate synthaseSAMN05444481_102372Not AvailablePositive982424 - 98392355658.6
3-isopropylmalate dehydrogenaseSAMN05444481_102373Not AvailablePositive984033 - 98509438619.2
rna recognition motif. (a.k.a. rrm, rbd, or rnp domain)SAMN05444481_102374Not AvailableNegative985224 - 98558312667.5
hypothetical proteinSAMN05444481_102375Not AvailableNegative985718 - 98620617933.4
ssu ribosomal protein s16pSAMN05444481_102376Not AvailablePositive986404 - 98696720133.6
16s rrna processing protein rimmSAMN05444481_102377Not AvailablePositive986983 - 98750720252.6
trna1val (adenine37-n6)-methyltransferaseSAMN05444481_102378Not AvailablePositive987598 - 98830527005.6

Displaying genes 811 – 820 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.