Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction endonuclease ruvcSAMN05444481_102284Not AvailablePositive890821 - 89137520563.3
four helix bundle proteinSAMN05444481_102285Not AvailablePositive891450 - 89182114510.3
oxygen-independent coproporphyrinogen-3 oxidaseSAMN05444481_102286Not AvailablePositive892037 - 89307739419.9
gxxexxy proteinSAMN05444481_102287Not AvailablePositive893200 - 89357714348.0
kynurenine formamidaseSAMN05444481_102288Not AvailablePositive893656 - 89442929067.5
acetyltransferase (gnat) domain-containing proteinSAMN05444481_102289Not AvailablePositive894589 - 89498715357.7
protein of unknown functionSAMN05444481_102290Not AvailablePositive894984 - 89533413336.7
predicted dna-binding protein, mmcq/yjbr familySAMN05444481_102291Not AvailablePositive895343 - 89571414280.9
ph domain-containing proteinSAMN05444481_102292Not AvailablePositive895786 - 89652027894.1
protein of unknown functionSAMN05444481_102293Not AvailableNegative896640 - 89774041254.2

Displaying genes 731 – 740 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.