Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii, alpha subunitSAMN05444481_12916Not AvailablePositive5379543 - 5382602117577.0
dna polymerase-3 subunit epsilonSAMN05444481_12917Not AvailablePositive5382802 - 538418152936.1
exodeoxyribonuclease-3SAMN05444481_12918Not AvailablePositive5384254 - 538503029478.5
alkylated dna repair dioxygenase alkbSAMN05444481_12919Not AvailablePositive5385038 - 538566424474.1
uncharacterized protein, duf1810 familySAMN05444481_12920Not AvailablePositive5385820 - 538628117361.8
amino acid/polyamine/organocation transporter, apc superfamilySAMN05444481_12921Not AvailableNegative5386573 - 538798551441.1
hypothetical proteinSAMN05444481_12923Not AvailablePositive5388415 - 538881314775.6
hypothetical proteinSAMN05444481_12924Not AvailablePositive5388846 - 538927716747.3
hypothetical proteinSAMN05444481_12925Not AvailablePositive5389381 - 538979115987.2
signal transduction histidine kinaseSAMN05444481_12926Not AvailablePositive5390179 - 539160654088.4

Displaying genes 4671 – 4680 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.