Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat-containing proteinSAMN05444481_12848Not AvailableNegative5354909 - 535661866253.6
alkylhydroperoxidase ahpd family core domain-containing proteinSAMN05444481_12849Not AvailableNegative5356796 - 535723016312.7
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN05444481_12850Not AvailableNegative5357308 - 535788022283.2
lsu ribosomal protein l20pSAMN05444481_12851Not AvailableNegative5358031 - 535837513199.4
lsu ribosomal protein l35pSAMN05444481_12852Not AvailableNegative5358476 - 53586737498.66
bacterial translation initiation factor 3 (bif-3)SAMN05444481_12853Not AvailableNegative5358807 - 535924116849.9
ser-trna(thr) hydrolase /threonyl-trna synthetaseSAMN05444481_12854Not AvailableNegative5359381 - 536132773870.2
luciferase family oxidoreductase, group 1SAMN05444481_1292Not AvailableNegative5362752 - 536375937278.4
dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domainsSAMN05444481_1293Not AvailablePositive5364043 - 536538650479.1
hypothetical proteinSAMN05444481_1294Not AvailablePositive5365727 - 536600810469.8

Displaying genes 4651 – 4660 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.