Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05444481_12021Not AvailablePositive4648475 - 464899919122.9
snoal-like domain-containing proteinSAMN05444481_12022Not AvailablePositive4649050 - 464952017842.3
amino acid/polyamine/organocation transporter, apc superfamilySAMN05444481_12023Not AvailablePositive4649652 - 465139464220.9
selenocysteine lyase/cysteine desulfuraseSAMN05444481_12025Not AvailableNegative4651665 - 465317656550.3
peptide-methionine (s)-s-oxide reductaseSAMN05444481_12026Not AvailablePositive4653334 - 465386720368.0
uncharacterized conserved protein ydiu, upf0061 familySAMN05444481_12027Not AvailablePositive4653988 - 465555660085.3
thioredoxin reductase (nadph)SAMN05444481_12028Not AvailableNegative4655655 - 465662336904.4
adenylate cyclaseSAMN05444481_12029Not AvailableNegative4656628 - 465710118295.6
outer membrane protein ompaSAMN05444481_12030Not AvailablePositive4657300 - 465821133048.5
hypothetical proteinSAMN05444481_12031Not AvailablePositive4658231 - 465878219492.4

Displaying genes 4031 – 4040 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.