Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyl-coa synthetase alpha subunitSAMN05444481_115106Not AvailableNegative4120266 - 412113829849.1
hypothetical proteinSAMN05444481_115107Not AvailableNegative4121223 - 412158514259.2
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseSAMN05444481_115108Not AvailableNegative4121587 - 412251633325.4
translation elongation factor p (ef-p)SAMN05444481_115109Not AvailableNegative4122652 - 412321820745.6
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseSAMN05444481_115110Not AvailableNegative4123311 - 412409628127.0
3-hydroxyacyl-[acyl-carrier-protein] dehydratase /udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseSAMN05444481_115111Not AvailableNegative4124169 - 412556651510.9
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseSAMN05444481_115112Not AvailableNegative4125550 - 412659337425.4
hypothetical proteinSAMN05444481_115113Not AvailableNegative4126633 - 412786247346.9
response regulator receiver domain-containing proteinSAMN05444481_115114Not AvailablePositive4128084 - 412963760071.3
trna threonylcarbamoyladenosine biosynthesis protein tsaeSAMN05444481_115115Not AvailablePositive4129804 - 413021115419.3

Displaying genes 3541 – 3550 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.