Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05444481_110117Not AvailableNegative3240679 - 324108615175.8
uncharacterized conserved protein yndb, ahsa1/start domainSAMN05444481_110118Not AvailableNegative3241236 - 324164015421.7
transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domainSAMN05444481_110119Not AvailablePositive3241810 - 324277236431.1
l,d-transpeptidase catalytic domainSAMN05444481_110121Not AvailableNegative3242934 - 324356323926.7
atp-dependent clp protease atp-binding subunit clpxSAMN05444481_110122Not AvailableNegative3243741 - 324497345667.6
atp-dependent clp protease, protease subunitSAMN05444481_110123Not AvailableNegative3245136 - 324581024977.2
trigger factorSAMN05444481_110125Not AvailableNegative3246184 - 324750649427.7
putative membrane proteinSAMN05444481_110126Not AvailableNegative3247625 - 324796912249.0
pimeloyl-acp methyl ester carboxylesteraseSAMN05444481_110127Not AvailableNegative3248119 - 324888329067.5
pyridoxine 5'-phosphate synthaseSAMN05444481_110128Not AvailableNegative3249013 - 324972626269.5

Displaying genes 2801 – 2810 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.