Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp-binding proteinSAMN05444481_10943Not AvailablePositive2967660 - 296866136399.7
outer membrane protein beta-barrel domain-containing proteinSAMN05444481_10944Not AvailableNegative2968766 - 296929619093.4
peptidase s46SAMN05444481_10945Not AvailablePositive2969611 - 297175580969.5
tonb-dependent outer membrane receptor, susc/raga subfamily, signature regionSAMN05444481_10946Not AvailableNegative2971905 - 2976338167500.0
mg2 domain-containing proteinSAMN05444481_10947Not AvailableNegative2976339 - 297840580566.1
udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligaseSAMN05444481_10948Not AvailablePositive2978610 - 297996550443.1
hypothetical proteinSAMN05444481_10949Not AvailableNegative2980102 - 298072823992.9
dna repair protein radcSAMN05444481_10950Not AvailablePositive2981005 - 298169425227.8
putative hydrolase of the had superfamilySAMN05444481_10951Not AvailablePositive2981698 - 298238426378.3
hypothetical proteinSAMN05444481_10952Not AvailablePositive2982387 - 298312727779.3

Displaying genes 2541 – 2550 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.