Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporter, fhs family, l-fucose permeaseSAMN05444481_105167Not AvailablePositive2134384 - 213567346811.5
altronate hydrolaseSAMN05444481_105168Not AvailablePositive2135690 - 213734559796.5
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05444481_105169Not AvailablePositive2137621 - 213838527031.5
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05444481_105170Not AvailablePositive2138541 - 213939531109.2
hexosaminidaseSAMN05444481_105171Not AvailablePositive2139670 - 214130161396.6
5'(3')-deoxyribonucleotidaseSAMN05444481_105172Not AvailableNegative2141437 - 214195519976.0
fucose permeaseSAMN05444481_105173Not AvailablePositive2142104 - 214327040999.8
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN05444481_105174Not AvailablePositive2143296 - 214396125263.6
transcriptional regulator, deor familySAMN05444481_105175Not AvailablePositive2144038 - 214478727698.4
cupin-like domain-containing proteinSAMN05444481_105176Not AvailableNegative2144873 - 214574534780.0

Displaying genes 1811 – 1820 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.