Flavobacterium frigidimaris

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigidimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigidimaris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigidimaris strain DSM 15937 genome assembly,

Gene Summary

Adenine Count

1882345 bp

Thymine Count

1865741 bp

Guanine Count

976182 bp

Cytosine Count

1014671 bp

Genome Length

5739183 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane proteinSAMN05444481_10442Not AvailablePositive1565936 - 156655022614.7
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN05444481_10443Not AvailablePositive1566667 - 156762637360.0
uncharacterized damage-inducible protein dinb (forms a four-helix bundle)SAMN05444481_10444Not AvailableNegative1567698 - 156817718712.3
6-phosphofructokinase 2SAMN05444481_10445Not AvailableNegative1568387 - 156931933333.9
thiamine-phosphate kinaseSAMN05444481_10446Not AvailablePositive1569705 - 157075138453.8
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN05444481_10447Not AvailableNegative1570840 - 157153826695.5
histidine kinaseSAMN05444481_10448Not AvailableNegative1571535 - 157356278562.4
hypothetical proteinSAMN05444481_10449Not AvailableNegative1573684 - 157397110104.0
dna-binding response regulator, lytr/algr familySAMN05444481_10450Not AvailableNegative1574146 - 157497931765.7
glycyl-trna synthetaseSAMN05444481_10451Not AvailableNegative1575226 - 157676459441.9

Displaying genes 1341 – 1350 of 5012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.