Flavobacterium psychrolimnae str. LMG 22018

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium psychrolimnae str. LMG 22018 is a Gram-negative, rod-shaped bacterium that thrives in the cold temperatures of its Antarctic habitat, with an optimal growth temperature of 16.0 °C. This psychrophilic microorganism is adapted to survive and proliferate in extreme cold environments, which typically exert selective pressure on metabolic and physiological processes. The rod morphology of F. psychrolimnae suggests structural adaptations that may enhance its survival in low-temperature niches, potentially influencing its nutrient uptake and cellular functions. The psychrophilic nature of this strain points to unique biochemical pathways that facilitate cellular activity at lower temperatures, which could include the production of cold-adapted enzymes that remain functional and efficient under such conditions. The ecological role of Flavobacterium psychrolimnae str. LMG 22018 within the Antarctic ecosystem may involve the degradation of organic matter, thereby contributing to nutrient cycling in this harsh environment. Its presence highlights the importance of microbial life in extreme climates, particularly in maintaining ecosystem balance and supporting food webs in regions where temperatures are consistently low. Understanding the adaptations of this bacterium could provide insights into microbial resilience and function in polar ecosystems, shedding light on the broader implications of climate change on microbial communities in similar habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium psychrolimnae
StrainLMG 22018

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium psychrolimnae str. LMG 22018
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatAntarctic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium psychrolimnae strain LMG 22018 23, whole genome

Gene Summary

Adenine Count

1212267 bp

Thymine Count

1191086 bp

Guanine Count

615038 bp

Cytosine Count

633650 bp

Genome Length

3652041 bp

Protein-coding Genes

3152 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-tyrosine-phosphataseDR980_00055Not AvailablePositive10234 - 1086923692.2
arsenical-resistance proteinDR980_00060Not AvailablePositive10869 - 1191538736.0
pyridine nucleotide-disulfide oxidoreductaseDR980_00065Not AvailablePositive11928 - 1298639330.1
tigr00341 family proteinDR980_00070Not AvailableNegative13033 - 1432848578.1
susc/raga family tonb-linked outer membrane proteinDR980_00075Not AvailablePositive14754 - 17741108321.0
ragb/susd family nutrient uptake outer membrane proteinDR980_00080Not AvailablePositive17753 - 1914451711.6
Ncrna_class:otherNot AvailableNot AvailablePositive19297 - 19403Not Available
arginaseDR980_00085Not AvailableNegative19220 - 2018235659.1
ornithine--oxo-acid transaminaseDR980_00090Not AvailableNegative20182 - 2146546699.9
asnc family transcriptional regulatorDR980_00095Not AvailablePositive21697 - 2214917168.9

Displaying genes 11 – 20 of 3200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.