Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis japonica
StrainMG417-CF17 (=DSM 44213)

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis japonica strain DSM 44213 plasmid pAmyja1, complete

Gene Summary

Adenine Count

13819 bp

Thymine Count

15581 bp

Guanine Count

32490 bp

Cytosine Count

30649 bp

Genome Length

92539 bp

Protein-coding Genes

132 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Von willebrand factor type a-like domain containing proteinAJAP_RS22675Not AvailableNegative4927172 - 4931176135922.0
zinc ribbon domain-containing proteinAJAP_RS22680Not AvailableNegative4931188 - 493216235332.3
phage tail proteinAJAP_RS22685Not AvailableNegative4932166 - 493270519509.2
Baseplate assembly proteinAJAP_RS22690Not AvailableNegative4932702 - 493466371015.1
Baseplate wedge subunitAJAP_RS22695Not AvailableNegative4934663 - 493507314882.8
Baseplate puncturing deviceAJAP_RS22700Not AvailableNegative4935075 - 49353568796.04
Tail proteinAJAP_RS22705Not AvailableNegative4935539 - 493735963547.5
lysm peptidoglycan-binding domain-containing proteinAJAP_RS22710Not AvailableNegative4937352 - 493811627243.3
phage tail proteinAJAP_RS22715Not AvailableNegative4938119 - 493856515939.0
AttlNot AvailableNot AvailablePositive5958370 - 5958381Not Available

Displaying genes 1 – 10 of 8608 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.