Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | B728a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1357034 bp
Thymine Count
1331887 bp
Guanine Count
1891949 bp
Cytosine Count
1937382 bp
Genome Length
6518252 bp
Protein-coding Genes
5783 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | PSYR_RS13500 | Not Available | Positive | 3059276 - 3059946 | 23629.4 |
| hypothetical protein | PSYR_RS27130 | Not Available | Negative | 3060008 - 3060214 | 7710.49 |
| adec/adek/oprm family multidrug efflux complex outer membrane factor | PSYR_RS13505 | Not Available | Negative | 3060225 - 3061643 | 51148.1 |
| helix-turn-helix transcriptional regulator | PSYR_RS13510 | Not Available | Negative | 3061640 - 3062470 | 30861.2 |
| syringomycin e biosynthesis non-ribosomal peptide synthetase syre | PSYR_RS13515 | Not Available | Negative | 3062695 - 3091068 | 1039260.0 |
| syringomycin e biosynthesis aminoacyltransferase syrc | PSYR_RS13520 | Not Available | Negative | 3091468 - 3092679 | 44334.5 |
| syringomycin e biosynthesis l-threonyl-[l-threonyl-carrier protein] 4-chlorinase syrb2 | PSYR_RS13525 | Not Available | Negative | 3092751 - 3093683 | 35362.2 |
| syringomycin e biosynthesis l-threonine--[l-threonyl-carrier protein] ligase syrb1 | PSYR_RS13530 | Not Available | Negative | 3093701 - 3095545 | 66241.6 |
| taud/tfda family dioxygenase | PSYR_RS13535 | Not Available | Positive | 3095877 - 3096938 | 39604.8 |
| cyclic peptide syringomycin export abc transporter syrd | PSYR_RS13540 | Not Available | Positive | 3097019 - 3098719 | 63225.4 |
Pathways
1328 pathways









