Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | B728a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1357034 bp
Thymine Count
1331887 bp
Guanine Count
1891949 bp
Cytosine Count
1937382 bp
Genome Length
6518252 bp
Protein-coding Genes
5783 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit dhak | PSYR_RS13305 | Not Available | Negative | 2979654 - 2980655 | 35343.7 |
| erythritol/l-threitol dehydrogenase | PSYR_RS13310 | Not Available | Negative | 2980696 - 2981811 | 41181.0 |
| sdr family oxidoreductase | PSYR_RS13315 | Not Available | Negative | 2981841 - 2982596 | 26279.6 |
| substrate-binding domain-containing protein | PSYR_RS13320 | Not Available | Negative | 2982805 - 2983815 | 36256.2 |
| abc transporter permease | PSYR_RS13325 | Not Available | Negative | 2983859 - 2984836 | 34179.9 |
| sugar abc transporter atp-binding protein | PSYR_RS13330 | Not Available | Negative | 2984833 - 2986320 | 53416.7 |
| ribose 5-phosphate isomerase b | PSYR_RS13335 | Not Available | Positive | 2986599 - 2987060 | 16254.4 |
| sugar-binding transcriptional regulator | PSYR_RS13340 | Not Available | Positive | 2987128 - 2988108 | 35422.7 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | PSYR_RS13345 | Not Available | Positive | 2988178 - 2990553 | 86073.6 |
| helix-turn-helix transcriptional regulator | PSYR_RS13350 | Not Available | Negative | 2990641 - 2991414 | 28205.8 |
Pathways
1328 pathways









