Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | B728a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1357034 bp
Thymine Count
1331887 bp
Guanine Count
1891949 bp
Cytosine Count
1937382 bp
Genome Length
6518252 bp
Protein-coding Genes
5783 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | PSYR_RS03800 | Not Available | Negative | 835946 - 837347 | 50713.4 |
| conjugal transfer nickase/helicase domain-containing protein | PSYR_RS27330 | Not Available | Negative | 837344 - 838102 | 27335.1 |
| mobh family relaxase | PSYR_RS27335 | Not Available | Negative | 838293 - 839261 | 35636.3 |
| sos response-associated peptidase family protein | PSYR_RS03810 | Not Available | Negative | 839680 - 840303 | 23092.6 |
| lexa family protein | PSYR_RS03815 | Not Available | Positive | 840487 - 840921 | 15647.0 |
| type iv secretion protein rhs | PSYR_RS03820 | Not Available | Positive | 840908 - 841150 | 9140.08 |
| duf3757 domain-containing protein | PSYR_RS03825 | Not Available | Negative | 841367 - 841780 | 14540.2 |
| type iii effector protein avrrpm1 | PSYR_RS03830 | Not Available | Negative | 842575 - 842979 | 14902.4 |
| type iv secretion protein rhs | PSYR_RS27015 | Not Available | Positive | 843620 - 843856 | 8844.54 |
| type iv secretion protein rhs | PSYR_RS03840 | Not Available | Negative | 844109 - 844366 | 9178.1 |
Pathways
1459 pathways









