Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | B728a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1357034 bp
Thymine Count
1331887 bp
Guanine Count
1891949 bp
Cytosine Count
1937382 bp
Genome Length
6518252 bp
Protein-coding Genes
5783 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PSYR_RS00520 | Not Available | Positive | 109452 - 111323 | 69115.1 |
| ktsc domain-containing protein | PSYR_RS00525 | Not Available | Positive | 111332 - 111541 | 7678.68 |
| hypothetical protein | PSYR_RS00530 | Not Available | Negative | 112145 - 112435 | 10490.0 |
| duf2778 domain-containing protein | PSYR_RS00535 | Not Available | Negative | 112435 - 112962 | 19562.9 |
| hcp family type vi secretion system effector | PSYR_RS00540 | Not Available | Negative | 112987 - 113487 | 17820.1 |
| hypothetical protein | PSYR_RS00545 | Not Available | Negative | 113906 - 114439 | 20233.5 |
| duf2513 domain-containing protein | PSYR_RS00550 | Not Available | Negative | 114514 - 114891 | 14208.2 |
| tir domain-containing protein | PSYR_RS00555 | Not Available | Positive | 115713 - 116873 | 43892.8 |
| is3 family transposase | PSYR_RS00560 | Not Available | Negative | 116991 - 118168 | 44992.5 |
| type iv secretion protein rhs | PSYR_RS27320 | Not Available | Positive | 118367 - 118596 | 8247.05 |
Pathways
1459 pathways









