Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | B728a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1357034 bp
Thymine Count
1331887 bp
Guanine Count
1891949 bp
Cytosine Count
1937382 bp
Genome Length
6518252 bp
Protein-coding Genes
5783 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rep-associated tyrosine transposase | PSYR_RS24430 | Not Available | Negative | 5577665 - 5578123 | 17347.5 |
| glxa family transcriptional regulator | PSYR_RS24435 | Not Available | Negative | 5578250 - 5579353 | 40996.6 |
| choline abc transporter substrate-binding protein | PSYR_RS24440 | Not Available | Positive | 5580137 - 5581084 | 34475.4 |
| choline abc transporter permease subunit | PSYR_RS24445 | Not Available | Positive | 5581149 - 5581997 | 30588.5 |
| choline abc transporter atp-binding protein | PSYR_RS24450 | Not Available | Positive | 5581994 - 5583172 | 43340.8 |
| serine hydroxymethyltransferase | PSYR_RS24455 | Not Available | Positive | 5583431 - 5584684 | 44876.3 |
| sarcosine oxidase subunit beta family protein | PSYR_RS24460 | Not Available | Positive | 5584702 - 5585952 | 45354.2 |
| sarcosine oxidase subunit delta | PSYR_RS24465 | Not Available | Positive | 5585968 - 5586264 | 11463.4 |
| sarcosine oxidase subunit alpha | PSYR_RS24470 | Not Available | Positive | 5586261 - 5589281 | 109573.0 |
| sarcosine oxidase subunit gamma | PSYR_RS24475 | Not Available | Positive | 5589332 - 5589964 | 23120.8 |
Pathways
1328 pathways









