Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | B728a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1357034 bp
Thymine Count
1331887 bp
Guanine Count
1891949 bp
Cytosine Count
1937382 bp
Genome Length
6518252 bp
Protein-coding Genes
5783 genes
Non-Coding Genes
172 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alternative ribosome rescue factor arfa | PSYR_RS22580 | Not Available | Positive | 5210075 - 5210230 | 5816.02 |
| lytic murein transglycosylase | PSYR_RS22585 | Not Available | Positive | 5210314 - 5211651 | 48148.9 |
| lipoyl synthase | PSYR_RS22590 | Not Available | Negative | 5211943 - 5212950 | 37666.9 |
| lipoyl(octanoyl) transferase lipb | PSYR_RS22595 | Not Available | Negative | 5212943 - 5213599 | 23818.6 |
| duf493 domain-containing protein | PSYR_RS22600 | Not Available | Negative | 5213599 - 5213874 | 10034.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | PSYR_RS22605 | Not Available | Negative | 5213965 - 5215125 | 42396.9 |
| septal ring lytic transglycosylase rlpa family protein | PSYR_RS22610 | Not Available | Negative | 5215367 - 5216395 | 36762.7 |
| lytic murein transglycosylase b | PSYR_RS22615 | Not Available | Negative | 5216395 - 5217402 | 37559.6 |
| rod shape-determining protein roda | PSYR_RS22620 | Not Available | Negative | 5217420 - 5218523 | 40133.8 |
| penicillin-binding protein 2 | PSYR_RS22625 | Not Available | Negative | 5218555 - 5220450 | 70170.3 |
Pathways
1328 pathways









