Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial group 3 ig-like protein | HMPREF1862_00891 | Not Available | Positive | 963560 - 965188 | 59274.6 |
| hypothetical protein | HMPREF1862_00892 | Not Available | Positive | 965392 - 965517 | 4773.07 |
| hypothetical protein | HMPREF1862_00893 | Not Available | Negative | 965534 - 966439 | 33216.7 |
| translation initiation factor sui1 domain protein | HMPREF1862_00894 | Not Available | Positive | 966499 - 966831 | 11825.3 |
| membrane protein | HMPREF1862_00895 | Not Available | Positive | 966833 - 967942 | 39822.0 |
| hypothetical protein | HMPREF1862_00897 | Not Available | Negative | 967948 - 968775 | 29381.1 |
| hypothetical protein | HMPREF1862_00896 | Not Available | Positive | 968768 - 968929 | 6237.59 |
| transporter, major facilitator family protein | HMPREF1862_00898 | Not Available | Negative | 968941 - 970944 | 70419.0 |
| transcriptional regulator, marr family | HMPREF1862_00899 | Not Available | Negative | 970984 - 971469 | 18125.3 |
| hypothetical protein | HMPREF1862_00900 | Not Available | Negative | 971576 - 972367 | 28905.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
