Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_00812 | Not Available | Negative | 871990 - 872196 | 6983.23 |
| hypothetical protein | HMPREF1862_00813 | Not Available | Positive | 872400 - 873191 | 27445.4 |
| had hydrolase, family iib | HMPREF1862_00814 | Not Available | Negative | 873195 - 874028 | 30254.9 |
| hypothetical protein | HMPREF1862_00815 | Not Available | Negative | 874110 - 874241 | 4857.96 |
| Trna-arg | Not Available | Not Available | Positive | 874243 - 874318 | Not Available |
| nad+ synthase | HMPREF1862_00817 | Not Available | Positive | 874431 - 876545 | 75538.0 |
| putative aminopeptidase | HMPREF1862_00818 | Not Available | Positive | 876784 - 878160 | 52329.0 |
| hypothetical protein | HMPREF1862_00819 | Not Available | Negative | 878157 - 878444 | 10498.3 |
| transporter, major facilitator family protein | HMPREF1862_00820 | Not Available | Positive | 878504 - 879772 | 44518.1 |
| addiction module antitoxin, relb/dinj family | HMPREF1862_00821 | Not Available | Positive | 880007 - 880300 | 10711.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
