Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_00059 | Not Available | Negative | 48053 - 49627 | 57170.4 |
| hypothetical protein | HMPREF1862_00060 | Not Available | Negative | 49620 - 52034 | 87081.3 |
| hypothetical protein | HMPREF1862_00061 | Not Available | Negative | 52872 - 53606 | 27521.6 |
| hypothetical protein | HMPREF1862_00062 | Not Available | Negative | 53593 - 54015 | 15230.4 |
| hypothetical protein | HMPREF1862_00063 | Not Available | Negative | 54008 - 54922 | 34279.7 |
| hypothetical protein | HMPREF1862_00064 | Not Available | Negative | 54965 - 56857 | 67236.8 |
| hypothetical protein | HMPREF1862_00065 | Not Available | Positive | 56963 - 57529 | 21490.7 |
| antirestriction protein arda | HMPREF1862_00066 | Not Available | Positive | 57551 - 58435 | 33374.6 |
| hypothetical protein | HMPREF1862_00067 | Not Available | Positive | 58457 - 58957 | 19016.9 |
| lpxtg-motif protein cell wall anchor domain protein | HMPREF1862_00068 | Not Available | Positive | 58979 - 59755 | 26638.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
