Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| global regulator protein | HMPREF1862_00682 | Not Available | Positive | 719151 - 719369 | 7956.67 |
| nad(p)(+) transhydrogenase, alpha subunit | HMPREF1862_00683 | Not Available | Positive | 719524 - 721080 | 54525.1 |
| putative nad(p) transhydrogenase subunit beta | HMPREF1862_00684 | Not Available | Positive | 721084 - 722625 | 53398.0 |
| hypothetical protein | HMPREF1862_00685 | Not Available | Negative | 722769 - 723485 | 25653.4 |
| thioredoxin | HMPREF1862_00686 | Not Available | Negative | 723578 - 723907 | 12051.6 |
| thioredoxin-disulfide reductase | HMPREF1862_00687 | Not Available | Negative | 723946 - 724866 | 32620.6 |
| putative integral membrane protein mvin | HMPREF1862_00688 | Not Available | Negative | 724981 - 728997 | 145046.0 |
| hypothetical protein | HMPREF1862_00689 | Not Available | Negative | 728957 - 731116 | 76270.7 |
| hydrolase, nudix family | HMPREF1862_00690 | Not Available | Negative | 731118 - 731552 | 15936.0 |
| trna adenylyltransferase | HMPREF1862_00691 | Not Available | Positive | 731708 - 733210 | 55900.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
