Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DNF00696 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
495674 bp
Thymine Count
486053 bp
Guanine Count
562782 bp
Cytosine Count
551080 bp
Genome Length
2095589 bp
Protein-coding Genes
1942 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1862_00612 | Not Available | Negative | 651065 - 651274 | 7759.05 |
| hypothetical protein | HMPREF1862_00613 | Not Available | Negative | 651338 - 651904 | 20549.6 |
| hypothetical protein | HMPREF1862_00614 | Not Available | Negative | 651953 - 652699 | 29046.9 |
| n-6 dna methylase | HMPREF1862_00615 | Not Available | Negative | 652756 - 654216 | 54691.0 |
| hypothetical protein | HMPREF1862_00616 | Not Available | Positive | 654217 - 655002 | 30312.5 |
| hypothetical protein | HMPREF1862_00617 | Not Available | Positive | 655066 - 655350 | 10857.9 |
| c-5 cytosine-specific dna methylase | HMPREF1862_00618 | Not Available | Negative | 655537 - 656571 | 37674.5 |
| hypothetical protein | HMPREF1862_00619 | Not Available | Negative | 656699 - 657280 | 21910.4 |
| hypothetical protein | HMPREF1862_00620 | Not Available | Negative | 657349 - 658143 | 30213.8 |
| hypothetical protein | HMPREF1862_00621 | Not Available | Negative | 658240 - 658752 | 18894.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
